Download Cytoscape 3.5.0 software

[Mirror1 download link] - file hosted by chianti.ucsd.edu

A visualization application for molecular interaction networks

Whats new in version 3.5.0:
Updated Welcome Screen:
• For convenience, Cytoscape shows Welcome Screen at startup time which provides easy way to access sample data sets and public databases.

Edge Bend Visual Property:
• Edge Bend is now a standard Visual Property. You can use it as a part of your Visual Style.

Edge Bundling:
• You can bundle edges by automatic Edge Bundling. This feature is useful for dense network views.

Network Annotations:
• You can add notes and simple shapes to background or foreground of network view.

Advanced Search Function:
• From this version, EnhancedSearch plugin is part of core. You can search networks using Lucene syntax.

Show All feature in Data Table Browser:
• By selecting Show All option in Data Table Browser, you can display all network objects in the table. Nodes and edges will be selected when you select associated rows in the table.

Network Collection:
• Cytoscape 3 manages networks based on Network Collection. When you load networks to Cytoscape, you can choose creating a ne...